Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is66 family insertion sequence hypothetical protein | DXB87_08990 | Not Available | Negative | 2042245 - 2042598 | 13241.8 |
| nad-dependent epimerase/dehydratase family protein | DXB87_09000 | Not Available | Negative | 2043610 - 2044563 | 35154.9 |
| glycine c-acetyltransferase | DXB87_09005 | Not Available | Positive | 2044694 - 2045884 | 43864.6 |
| duf2075 domain-containing protein | DXB87_09010 | Not Available | Negative | 2046003 - 2047424 | 53865.3 |
| hypothetical protein | DXB87_09015 | Not Available | Positive | 2047519 - 2048205 | 25542.9 |
| duf3822 family protein | DXB87_09020 | Not Available | Positive | 2048210 - 2049034 | 31956.3 |
| methyltransferase domain-containing protein | DXB87_09025 | Not Available | Positive | 2049025 - 2049591 | 21845.1 |
| cardiolipin synthase | DXB87_09030 | Not Available | Negative | 2049551 - 2050984 | 55064.5 |
| tonb-dependent receptor | DXB87_09035 | Not Available | Negative | 2051086 - 2053983 | 107695.0 |
| hypothetical protein | DXB87_09040 | Not Available | Negative | 2054068 - 2054475 | 15525.8 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

