Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit nuok | DXB87_08835 | Not Available | Negative | 1989151 - 1989468 | 11768.7 |
| nadh-quinone oxidoreductase subunit j | DXB87_08840 | Not Available | Negative | 1989481 - 1989996 | 18415.7 |
| 4fe-4s dicluster domain-containing protein | DXB87_08845 | Not Available | Negative | 1990013 - 1990462 | 17131.1 |
| nadh-quinone oxidoreductase subunit nuoh | DXB87_08850 | Not Available | Negative | 1990479 - 1991570 | 40301.7 |
| nadh-quinone oxidoreductase subunit d | DXB87_08855 | Not Available | Negative | 1991627 - 1993246 | 61432.7 |
| nadh-quinone oxidoreductase subunit b | DXB87_08860 | Not Available | Negative | 1993273 - 1993854 | 21882.7 |
| nadh-quinone oxidoreductase subunit a | DXB87_08865 | Not Available | Negative | 1993845 - 1994195 | 12989.4 |
| hypothetical protein | DXB87_08870 | Not Available | Negative | 1994308 - 1994670 | 13820.6 |
| hypothetical protein | DXB87_08875 | Not Available | Negative | 1994814 - 1997147 | 88907.0 |
| hypothetical protein | DXB87_08880 | Not Available | Negative | 1997119 - 2001753 | 171894.0 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

