Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amp nucleosidase | DXB87_08585 | Not Available | Positive | 1921973 - 1922749 | 29211.4 |
| dna polymerase iii subunit delta | DXB87_08590 | Not Available | Positive | 1922760 - 1923776 | 38906.2 |
| xre family transcriptional regulator | DXB87_08595 | Not Available | Positive | 1924485 - 1924934 | 17140.6 |
| dihydroorotate dehydrogenase electron transfer subunit | DXB87_08600 | Not Available | Positive | 1925029 - 1925805 | 28251.7 |
| dihydroorotate dehydrogenase | DXB87_08605 | Not Available | Positive | 1925793 - 1926704 | 32258.3 |
| hypothetical protein | DXB87_08610 | Not Available | Positive | 1927123 - 1927839 | 27991.3 |
| ankyrin repeat domain-containing protein | DXB87_08615 | Not Available | Negative | 1927902 - 1928375 | 17966.3 |
| hypothetical protein | DXB87_08620 | Not Available | Negative | 1928483 - 1929148 | 26214.5 |
| hypothetical protein | DXB87_08625 | Not Available | Negative | 1929957 - 1930529 | 22819.2 |
| hypothetical protein | DXB87_08630 | Not Available | Negative | 1930621 - 1931055 | 16981.6 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

