Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3805 domain-containing protein | DXB87_08435 | Not Available | Positive | 1889842 - 1890666 | 31196.6 |
| abc transporter atp-binding protein | DXB87_08440 | Not Available | Positive | 1890707 - 1892572 | 72278.5 |
| long-chain fatty acid--coa ligase | DXB87_08445 | Not Available | Negative | 1892717 - 1894369 | 62474.9 |
| na+/h+ antiporter nhac family protein | DXB87_08450 | Not Available | Positive | 1894607 - 1895911 | 46390.1 |
| duf4286 family protein | DXB87_08455 | Not Available | Positive | 1895967 - 1896272 | 11954.5 |
| crossover junction endodeoxyribonuclease ruvc | DXB87_08460 | Not Available | Positive | 1896269 - 1896838 | 20855.9 |
| type i pullulanase | DXB87_08465 | Not Available | Positive | 1896851 - 1898851 | 74439.8 |
| atp-binding cassette domain-containing protein | DXB87_08470 | Not Available | Positive | 1898901 - 1900352 | 54865.5 |
| hypothetical protein | DXB87_08475 | Not Available | Negative | 1900318 - 1900533 | 8074.52 |
| nitronate monooxygenase | DXB87_08480 | Not Available | Negative | 1900607 - 1901557 | 34475.6 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

