Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtra family protein | DXB87_08285 | Not Available | Positive | 1858303 - 1858692 | 15077.8 |
| amino acid-binding protein | DXB87_08290 | Not Available | Negative | 1858689 - 1859117 | 15848.2 |
| phenylacetate--coa ligase | DXB87_08295 | Not Available | Negative | 1859130 - 1860428 | 49265.7 |
| glycine dehydrogenase (aminomethyl-transferring) | DXB87_08300 | Not Available | Negative | 1860703 - 1863552 | 104186.0 |
| mbl fold metallo-hydrolase | DXB87_08305 | Not Available | Negative | 1863599 - 1864240 | 23997.7 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | DXB87_08310 | Not Available | Negative | 1864246 - 1864872 | 23805.1 |
| duf3298 domain-containing protein | DXB87_08315 | Not Available | Negative | 1864879 - 1865745 | 32126.0 |
| lipoyl(octanoyl) transferase lipb | DXB87_08320 | Not Available | Positive | 1865903 - 1866568 | 25221.4 |
| hypothetical protein | DXB87_08325 | Not Available | Negative | 1866597 - 1867283 | 26635.7 |
| sugar o-acetyltransferase | DXB87_08330 | Not Available | Positive | 1867481 - 1868044 | 20584.0 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

