Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXB87_00525 | Not Available | Positive | 146144 - 146698 | 21419.8 |
| nucleoside triphosphate pyrophosphohydrolase | DXB87_00530 | Not Available | Positive | 146748 - 147536 | 30424.3 |
| act domain-containing protein | DXB87_00535 | Not Available | Positive | 147680 - 147952 | 10137.6 |
| pfl family protein | DXB87_00540 | Not Available | Positive | 147970 - 149334 | 47716.2 |
| atp-dependent dna helicase | DXB87_00545 | Not Available | Positive | 149547 - 151901 | 89544.4 |
| carboxynorspermidine decarboxylase | DXB87_00550 | Not Available | Positive | 151917 - 153080 | 44656.1 |
| Trna-gly | Not Available | Not Available | Positive | 153465 - 153537 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 153572 - 153655 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 153662 - 153737 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 153771 - 153854 | Not Available |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

