Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenine nucleotide alpha hydrolase family protein | DXB87_08170 | Not Available | Positive | 1830771 - 1831535 | 29412.0 |
| crp/fnr family transcriptional regulator | DXB87_08175 | Not Available | Negative | 1831539 - 1832162 | 23483.6 |
| hydroxylamine reductase | DXB87_08180 | Not Available | Positive | 1832277 - 1833929 | 60576.1 |
| m20/m25/m40 family metallo-hydrolase | DXB87_08185 | Not Available | Negative | 1833934 - 1834950 | 37866.8 |
| hypothetical protein | DXB87_08195 | Not Available | Negative | 1837036 - 1837347 | 11266.3 |
| cupin domain-containing protein | DXB87_08200 | Not Available | Negative | 1837433 - 1838254 | 30394.9 |
| atp-binding protein | DXB87_08205 | Not Available | Positive | 1838501 - 1839820 | 51312.8 |
| helicase | DXB87_08210 | Not Available | Negative | 1839951 - 1842908 | 113992.0 |
| hypothetical protein | DXB87_08215 | Not Available | Negative | 1842905 - 1844689 | 67722.4 |
| hypothetical protein | DXB87_08220 | Not Available | Negative | 1844682 - 1845860 | 45860.3 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

