Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease iii | DXB87_07960 | Not Available | Negative | 1789663 - 1790682 | 38777.8 |
| beta-ketoacyl-[acyl-carrier-protein] synthase ii | DXB87_07965 | Not Available | Negative | 1790686 - 1791951 | 44670.8 |
| acyl carrier protein | DXB87_07970 | Not Available | Negative | 1791967 - 1792203 | 8436.89 |
| 4-phosphoerythronate dehydrogenase pdxb | DXB87_07975 | Not Available | Negative | 1792362 - 1793372 | 37941.4 |
| glycosyltransferase family 2 protein | DXB87_07980 | Not Available | Positive | 1793617 - 1794333 | 27327.8 |
| hypothetical protein | DXB87_07985 | Not Available | Positive | 1794346 - 1795086 | 28301.1 |
| glycosyltransferase | DXB87_07990 | Not Available | Positive | 1795096 - 1795992 | 34446.4 |
| abc transporter atp-binding protein | DXB87_07995 | Not Available | Negative | 1796062 - 1797903 | 69465.6 |
| acetyltransferase | DXB87_08000 | Not Available | Positive | 1798049 - 1798957 | 37375.6 |
| glycosyltransferase | DXB87_08005 | Not Available | Positive | 1798969 - 1799868 | 33957.0 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

