Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation transporter | DXB87_07805 | Not Available | Positive | 1734032 - 1734934 | 32572.5 |
| nad(p)-dependent oxidoreductase | DXB87_07810 | Not Available | Positive | 1734939 - 1735949 | 38978.1 |
| phosphatase pap2 family protein | DXB87_07815 | Not Available | Positive | 1735946 - 1736920 | 37987.1 |
| trna dihydrouridine synthase dusb | DXB87_07820 | Not Available | Negative | 1736936 - 1737922 | 36876.1 |
| u32 family peptidase | DXB87_07825 | Not Available | Positive | 1738011 - 1739282 | 47574.3 |
| duf3843 family protein | DXB87_07830 | Not Available | Positive | 1739565 - 1741061 | 57951.0 |
| trna 2-thiouridine(34) synthase mnma | DXB87_07835 | Not Available | Negative | 1741062 - 1742111 | 39633.9 |
| hypothetical protein | DXB87_07845 | Not Available | Negative | 1745049 - 1745174 | 4819.11 |
| hypothetical protein | DXB87_07850 | Not Available | Positive | 1745354 - 1747657 | 88343.4 |
| sgnh/gdsl hydrolase family protein | DXB87_07855 | Not Available | Positive | 1747680 - 1748360 | 25919.1 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

