Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXB87_00470 | Not Available | Positive | 133894 - 134343 | 17008.0 |
| hypothetical protein | DXB87_00475 | Not Available | Positive | 134355 - 135353 | 38249.1 |
| hypothetical protein | DXB87_00480 | Not Available | Negative | 135944 - 136147 | 7692.42 |
| sigma-70 family rna polymerase sigma factor | DXB87_00485 | Not Available | Positive | 136146 - 136652 | 19775.9 |
| hypothetical protein | DXB87_00490 | Not Available | Positive | 136649 - 137116 | 18113.4 |
| hypothetical protein | DXB87_00495 | Not Available | Positive | 137129 - 137575 | 17284.1 |
| hypothetical protein | DXB87_00500 | Not Available | Positive | 137603 - 138490 | 33320.7 |
| valine--trna ligase | DXB87_00505 | Not Available | Negative | 138566 - 141244 | 101749.0 |
| dinitrogenase iron-molybdenum cofactor biosynthesis protein | DXB87_00510 | Not Available | Positive | 141417 - 141794 | 13245.8 |
| metallophosphoesterase | DXB87_00515 | Not Available | Positive | 142061 - 143734 | 64005.0 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

