Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease | DXB87_07535 | Not Available | Positive | 1656309 - 1657973 | 60186.1 |
| 3'(2'),5'-bisphosphate nucleotidase | DXB87_07540 | Not Available | Positive | 1658069 - 1658878 | 30096.6 |
| slc13/dass family transporter | DXB87_07545 | Not Available | Positive | 1658890 - 1660431 | 56915.2 |
| adenylyl-sulfate kinase | DXB87_07550 | Not Available | Positive | 1660457 - 1661068 | 22682.5 |
| sulfate adenylyltransferase subunit cysd | DXB87_07555 | Not Available | Positive | 1661081 - 1661992 | 35775.9 |
| sulfate adenylyltransferase subunit cysn | DXB87_07560 | Not Available | Positive | 1662005 - 1663510 | 56342.6 |
| sulfotransferase | DXB87_07565 | Not Available | Positive | 1663569 - 1664675 | 43659.4 |
| glycoside hydrolase family 28 protein | DXB87_07570 | Not Available | Negative | 1664870 - 1666279 | 53829.1 |
| hypothetical protein | DXB87_07575 | Not Available | Negative | 1666352 - 1668715 | 91719.0 |
| glycosyl hydrolase family 43 | DXB87_07580 | Not Available | Negative | 1668715 - 1670082 | 51799.8 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

