Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrolipoamide acyltransferase | DXB87_07215 | Not Available | Positive | 1577305 - 1577673 | 12900.4 |
| transporter | DXB87_07220 | Not Available | Negative | 1577957 - 1579555 | 56683.0 |
| helicase | DXB87_07225 | Not Available | Negative | 1579633 - 1581525 | 72523.4 |
| dmt family transporter | DXB87_07230 | Not Available | Negative | 1581518 - 1582447 | 33604.1 |
| atp-binding protein | DXB87_07235 | Not Available | Positive | 1582566 - 1583390 | 31165.6 |
| duf4435 domain-containing protein | DXB87_07240 | Not Available | Positive | 1583405 - 1584403 | 39358.6 |
| hypothetical protein | DXB87_07245 | Not Available | Positive | 1584447 - 1585409 | 38009.6 |
| gntr family transcriptional regulator | DXB87_07250 | Not Available | Negative | 1585477 - 1586313 | 31967.6 |
| endonuclease | DXB87_07255 | Not Available | Positive | 1586480 - 1587349 | 32836.8 |
| abc transporter atp-binding protein | DXB87_07260 | Not Available | Negative | 1587421 - 1588071 | 23639.7 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

