Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DXB87_07165 | Not Available | Positive | 1567073 - 1569457 | 90049.3 |
| hypothetical protein | DXB87_07170 | Not Available | Negative | 1569661 - 1570077 | 16513.5 |
| hypothetical protein | DXB87_07175 | Not Available | Negative | 1570268 - 1570669 | 14816.6 |
| sigma-70 family rna polymerase sigma factor | DXB87_07180 | Not Available | Positive | 1570801 - 1571346 | 21271.2 |
| hypothetical protein | DXB87_07185 | Not Available | Positive | 1571350 - 1571709 | 14338.9 |
| acyl-coa dehydrogenase | DXB87_07190 | Not Available | Negative | 1571783 - 1573489 | 63986.9 |
| electron transfer flavoprotein subunit alpha/fixb family protein | DXB87_07195 | Not Available | Negative | 1573489 - 1574508 | 37023.6 |
| electron transfer flavoprotein beta subunit/fixa family protein | DXB87_07200 | Not Available | Negative | 1574514 - 1575401 | 31577.9 |
| tlpa family protein disulfide reductase | DXB87_07205 | Not Available | Negative | 1575421 - 1575999 | 21871.7 |
| mechanosensitive ion channel family protein | DXB87_07210 | Not Available | Positive | 1576084 - 1577298 | 45965.6 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

