Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoserine phosphatase serb | DXB87_07050 | Not Available | Negative | 1538147 - 1539379 | 45792.7 |
| molecular chaperone htpg | DXB87_07055 | Not Available | Negative | 1539505 - 1541556 | 78394.4 |
| atp-dependent clp protease atp-binding subunit | DXB87_07060 | Not Available | Negative | 1541676 - 1544213 | 95270.7 |
| hypothetical protein | DXB87_07065 | Not Available | Negative | 1544219 - 1544422 | 8166.34 |
| dna gyrase subunit a | DXB87_07070 | Not Available | Positive | 1544460 - 1547006 | 95895.8 |
| hypothetical protein | DXB87_07075 | Not Available | Positive | 1547055 - 1548272 | 45299.7 |
| hypothetical protein | DXB87_07090 | Not Available | Positive | 1550187 - 1550402 | 8260.78 |
| nadph-flavin oxidoreductase | DXB87_07100 | Not Available | Positive | 1551012 - 1552007 | 37079.9 |
| yjgp/yjgq family permease | DXB87_07105 | Not Available | Negative | 1552084 - 1553259 | 45522.9 |
| trna guanosine(34) transglycosylase tgt | DXB87_07110 | Not Available | Negative | 1553281 - 1554411 | 42537.3 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

