Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4293 family protein | DXB87_06990 | Not Available | Positive | 1525659 - 1526114 | 17390.1 |
| mbl fold metallo-hydrolase | DXB87_06995 | Not Available | Negative | 1526198 - 1527004 | 30395.4 |
| hypothetical protein | DXB87_07000 | Not Available | Positive | 1527049 - 1527228 | 6908.41 |
| glucuronate isomerase | DXB87_07005 | Not Available | Negative | 1527244 - 1528650 | 54302.4 |
| tagaturonate reductase | DXB87_07010 | Not Available | Positive | 1528963 - 1530408 | 54290.8 |
| hypothetical protein | DXB87_07015 | Not Available | Positive | 1530537 - 1531325 | 30324.5 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | DXB87_07020 | Not Available | Negative | 1531307 - 1531699 | 14988.0 |
| prolipoprotein diacylglyceryl transferase | DXB87_07025 | Not Available | Negative | 1531692 - 1532519 | 31777.5 |
| thiol:disulfide interchange protein | DXB87_07040 | Not Available | Positive | 1534482 - 1536707 | 84535.6 |
| atp-dependent helicase | DXB87_07045 | Not Available | Negative | 1536852 - 1538126 | 47562.6 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

