Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | DXB87_06835 | Not Available | Negative | 1488124 - 1488924 | 30656.2 |
| glycosyltransferase family 1 protein | DXB87_06840 | Not Available | Negative | 1488926 - 1489999 | 41273.7 |
| o-antigen polysaccharide polymerase wzy | DXB87_06845 | Not Available | Negative | 1489996 - 1491162 | 44802.9 |
| glycosyltransferase family 2 protein | DXB87_06850 | Not Available | Negative | 1491175 - 1492050 | 34581.2 |
| glycosyltransferase family 2 protein | DXB87_06855 | Not Available | Negative | 1492067 - 1493056 | 38413.0 |
| glycosyl transferase | DXB87_06860 | Not Available | Negative | 1493058 - 1493798 | 29144.3 |
| glycosyltransferase family 2 protein | DXB87_06865 | Not Available | Negative | 1493780 - 1494766 | 38004.3 |
| glycosyltransferase | DXB87_06870 | Not Available | Negative | 1494763 - 1495707 | 36188.7 |
| lipopolysaccharide biosynthesis protein | DXB87_06875 | Not Available | Negative | 1495704 - 1497230 | 57448.3 |
| duf3791 domain-containing protein | DXB87_06880 | Not Available | Positive | 1497917 - 1498141 | 8957.7 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

