Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2958 domain-containing protein | DXB87_06310 | Not Available | Positive | 1364686 - 1365060 | 14160.0 |
| hypothetical protein | DXB87_06315 | Not Available | Positive | 1365113 - 1365484 | 14316.3 |
| hypothetical protein | DXB87_06320 | Not Available | Positive | 1365481 - 1365780 | 12121.9 |
| duf1738 domain-containing protein | DXB87_06325 | Not Available | Negative | 1365860 - 1367086 | 46468.7 |
| hypothetical protein | DXB87_06330 | Not Available | Negative | 1367092 - 1367697 | 22262.9 |
| glucosaminidase | DXB87_06335 | Not Available | Negative | 1367756 - 1369360 | 58674.9 |
| duf1738 domain-containing protein | DXB87_06340 | Not Available | Negative | 1369380 - 1371797 | 92285.9 |
| hypothetical protein | DXB87_06345 | Not Available | Negative | 1371825 - 1373660 | 67996.0 |
| hypothetical protein | DXB87_06350 | Not Available | Negative | 1373660 - 1373959 | 11822.0 |
| m23 family peptidase | DXB87_06355 | Not Available | Negative | 1373971 - 1374798 | 31178.6 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

