Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXB87_06210 | Not Available | Positive | 1350499 - 1350753 | 9549.24 |
| ribonuclease p | DXB87_06215 | Not Available | Positive | 1350758 - 1350934 | 6718.02 |
| hypothetical protein | DXB87_06220 | Not Available | Negative | 1351040 - 1351348 | 12443.0 |
| hypothetical protein | DXB87_06225 | Not Available | Negative | 1351463 - 1351642 | 6762.09 |
| single-stranded dna-binding protein | DXB87_06230 | Not Available | Positive | 1351679 - 1352062 | 14570.2 |
| hypothetical protein | DXB87_06235 | Not Available | Positive | 1352341 - 1352547 | 7790.57 |
| hypothetical protein | DXB87_06240 | Not Available | Negative | 1352776 - 1353000 | 8340.72 |
| ribonucleotide-diphosphate reductase subunit alpha | DXB87_06245 | Not Available | Positive | 1353066 - 1353644 | 21849.3 |
| duf1273 family protein | DXB87_06250 | Not Available | Positive | 1353634 - 1354146 | 19471.7 |
| hypothetical protein | DXB87_06255 | Not Available | Negative | 1354355 - 1354840 | 18474.2 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

