Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4369 domain-containing protein | DXB87_06060 | Not Available | Positive | 1315062 - 1315757 | 26202.9 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | DXB87_06065 | Not Available | Negative | 1315802 - 1316551 | 28403.2 |
| metallophosphoesterase | DXB87_06070 | Not Available | Negative | 1316566 - 1317735 | 44364.3 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | DXB87_06075 | Not Available | Negative | 1317750 - 1318655 | 34364.2 |
| dihydroorotase | DXB87_06080 | Not Available | Negative | 1318666 - 1320006 | 49276.0 |
| polyprenol monophosphomannose synthase | DXB87_06085 | Not Available | Negative | 1320016 - 1320762 | 28602.5 |
| type ii pantothenate kinase | DXB87_06090 | Not Available | Positive | 1321159 - 1321995 | 29691.3 |
| tetratricopeptide repeat protein | DXB87_06095 | Not Available | Negative | 1322040 - 1324205 | 84748.4 |
| hypothetical protein | DXB87_06100 | Not Available | Positive | 1324322 - 1324504 | 7381.57 |
| hypothetical protein | DXB87_06105 | Not Available | Positive | 1324553 - 1325143 | 20958.1 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

