Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diacylglucosamine hydrolase | DXB87_05660 | Not Available | Positive | 1217041 - 1217667 | 23819.1 |
| hypothetical protein | DXB87_05665 | Not Available | Negative | 1217630 - 1218298 | 26118.4 |
| duf4251 domain-containing protein | DXB87_05670 | Not Available | Positive | 1218465 - 1219016 | 19642.8 |
| duf4136 domain-containing protein | DXB87_05675 | Not Available | Positive | 1219033 - 1219656 | 23556.6 |
| porin family protein | DXB87_05680 | Not Available | Positive | 1219675 - 1220301 | 23324.8 |
| Trna-glu | Not Available | Not Available | Positive | 1220356 - 1220430 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 1220470 - 1220544 | Not Available |
| fimbrillin family protein | DXB87_05695 | Not Available | Positive | 1221312 - 1222337 | 37701.6 |
| hypothetical protein | DXB87_05700 | Not Available | Positive | 1222357 - 1223940 | 57955.4 |
| tonb-dependent receptor | DXB87_05705 | Not Available | Positive | 1223964 - 1227122 | 117309.0 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

