Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3853 family protein | DXB87_05590 | Not Available | Negative | 1201045 - 1201353 | 11301.9 |
| duf1016 family protein | DXB87_05600 | Not Available | Negative | 1202653 - 1203939 | 48663.1 |
| beta-n-acetylhexosaminidase | DXB87_05615 | Not Available | Positive | 1205594 - 1207675 | 78564.3 |
| hypothetical protein | DXB87_05620 | Not Available | Negative | 1207682 - 1208722 | 39094.2 |
| hamp domain-containing protein | DXB87_05630 | Not Available | Negative | 1211226 - 1212596 | 52613.7 |
| dna-binding response regulator | DXB87_05635 | Not Available | Negative | 1212593 - 1213288 | 26526.2 |
| Trna-ala | Not Available | Not Available | Positive | 1213369 - 1213442 | Not Available |
| n-acetyltransferase | DXB87_05645 | Not Available | Positive | 1213561 - 1214055 | 18975.7 |
| pyridine nucleotide-disulfide oxidoreductase | DXB87_05650 | Not Available | Positive | 1214187 - 1216634 | 89427.4 |
| marr family transcriptional regulator | DXB87_05655 | Not Available | Positive | 1216637 - 1217026 | 14423.7 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

