Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXB87_05475 | Not Available | Positive | 1177128 - 1178009 | 33185.2 |
| hypothetical protein | DXB87_05480 | Not Available | Negative | 1178200 - 1178646 | 16883.7 |
| hypothetical protein | DXB87_05490 | Not Available | Negative | 1179103 - 1179459 | 13447.5 |
| leucine-rich repeat domain-containing protein | DXB87_05495 | Not Available | Negative | 1179588 - 1181624 | 76888.2 |
| hypothetical protein | DXB87_05500 | Not Available | Negative | 1182085 - 1182291 | 8235.58 |
| dna resolvase | DXB87_05505 | Not Available | Negative | 1182300 - 1182938 | 24288.6 |
| hypothetical protein | DXB87_05510 | Not Available | Negative | 1183033 - 1183266 | 9620.83 |
| hypothetical protein | DXB87_05515 | Not Available | Negative | 1183272 - 1183517 | 9753.49 |
| duf3871 family protein | DXB87_05520 | Not Available | Negative | 1183612 - 1184574 | 37042.1 |
| Trna-asp | Not Available | Not Available | Positive | 1185312 - 1185385 | Not Available |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

