Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chloramphenicol acetyltransferase | DXB87_05175 | Not Available | Positive | 1098557 - 1099207 | 25067.7 |
| hypothetical protein | DXB87_05180 | Not Available | Positive | 1099232 - 1100200 | 36718.3 |
| ragb/susd family nutrient uptake outer membrane protein | DXB87_05185 | Not Available | Negative | 1100197 - 1101687 | 55141.6 |
| tonb-dependent receptor | DXB87_05190 | Not Available | Negative | 1101702 - 1104779 | 113892.0 |
| non-canonical purine ntp diphosphatase | DXB87_05195 | Not Available | Negative | 1104958 - 1105539 | 21255.2 |
| beta-n-acetylhexosaminidase | DXB87_05200 | Not Available | Negative | 1105545 - 1107881 | 86766.5 |
| glycoside hydrolase family 2 protein | DXB87_05205 | Not Available | Negative | 1107915 - 1110488 | 99135.8 |
| yitt family protein | DXB87_05210 | Not Available | Negative | 1110606 - 1111502 | 33466.7 |
| leucine--trna ligase | DXB87_05215 | Not Available | Negative | 1111572 - 1114406 | 108051.0 |
| duf4982 domain-containing protein | DXB87_05220 | Not Available | Positive | 1114547 - 1116985 | 92185.1 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

