Rhodococcus jostii RHA1

Gram-positiveCocciNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus jostii RHA1. This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. This organism may be useful in the bioremediation of contaminated environmental sites. (NCBI BioProject: bp_list[1])

Taxonomy

Kingdom	Bacillati
Phylum	Actinomycetota
Class	Actinomycetes
Order	Mycobacteriales
Family	Nocardiaceae
Genus	Rhodococcus
Species	Rhodococcus jostii
Strain	RHA1

Profile

Physiology
Gram staining properties	Positive
Shape	Cocci
Mobility	No
Flagellar presence	Yes
Number of membranes	Not Available

AI-generated image based on bacteria physiology

Ecology, Host, and Life Cycle
Oxygen requirements	Aerobe
Optimal temperature	30
Temperature range	Mesophilic
Habitat	Terrestrial
Biotic relationship	Free living
Host(s)	Not Available
Cell arrangement	Filaments
Sporulation	Nonsporulating
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Rhodococcus jostii RHA1 plasmid pRHL2, complete sequence.

NC_008270.1 NC_008269.1 NC_008271.1 NC_008268.1

Gene Summary

Adenine Count

79347 bp

Thymine Count

79919 bp

Guanine Count

143453 bp

Cytosine Count

139817 bp

Genome Length

442536 bp

Protein-coding Genes

416 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
aliphatic amidase	RHA1_RS41525	Not Available	Positive	162088 - 163125	37911.6
tubulin-like doman-containing protein	RHA1_RS41530	Not Available	Positive	163335 - 164879	55760.6
hypothetical protein	RHA1_RS41535	Not Available	Positive	164898 - 165197	11094.1
hypothetical protein	RHA1_RS41540	Not Available	Positive	165209 - 166915	63022.0
helix-turn-helix domain-containing protein	RHA1_RS53070	Not Available	Positive	167036 - 167287	9229.96
hoxn/hupn/nixa family nickel/cobalt transporter	RHA1_RS41550	Not Available	Positive	167710 - 168804	39062.9
acetyl-coa hydrolase/transferase family protein	RHA1_RS41555	Not Available	Positive	169674 - 171191	54540.0
is110 family transposase	RHA1_RS41560	Not Available	Positive	171372 - 172196	29876.9
n-formylglutamate amidohydrolase	RHA1_RS52680	Not Available	Negative	172487 - 172693	6905.26
sdr family nad(p)-dependent oxidoreductase	RHA1_RS41570	Not Available	Negative	172696 - 173493	28367.3

Displaying genes 151 – 160 of 9054 in total

Pathways

1362 pathways

2,3-Dihydroxybenzoate Biosynthesis

Biosynthesis of Siderophore Group Nonribosomal Peptides

Lysine Biosynthesis

Taurine Metabolism

Glycolysis and Pyruvate Dehydrogenase

Arginine Metabolism

Ornithine Metabolism

Proline Metabolism

Show All 1362 Pathways

Metabolite ID	Metabolite name	CAS number	Average mass Monoisotopic mass
BASm0000250	2,5-didehydro-D-gluconateC6H7O7	`53736-12-2`	Average191.1156Da Monoisotopic191.019177578Da
BASm0000253	2-oxopent-4-enoateC5H5O3	Not available	Average113.093Da Monoisotopic113.024417601Da
BASm0000260	3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5	Not available	Average405.556Da Monoisotopic405.264647871Da
BASm0000274	aldehydo-D-galacturonateC6H9O7	Not available	Average193.132Da Monoisotopic193.0353762Da
BASm0000377	(S)-malateC4H4O5	Not available	Average132.0716Da Monoisotopic132.005873238Da
BASm0000428	3-oxoadipateC6H6O5	Not available	Average158.11Da Monoisotopic158.022620453Da
BASm0000516	6-deoxyerythronolide BC21H38O6	Not available	Average386.5228Da Monoisotopic386.2668389Da
BASm0000553	biphenyl-2,3-diolC12H10O2	Not available	Average186.2066Da Monoisotopic186.0680796Da
BASm0000592	(S)-1-phenylethanolC8H10O	Not available	Average122.1644Da Monoisotopic122.0731649Da
BASm0000599	2,5-dihydroxypyridineC5H5NO2	Not available	Average111.1Da Monoisotopic111.0320284Da

Displaying 1–10 of 1471 metabolites

Health Effects

No health effects information available for this bacterium.