Rhodococcus jostii RHA1

Gram-positiveCocciNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus jostii RHA1. This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. This organism may be useful in the bioremediation of contaminated environmental sites. (NCBI BioProject: bp_list[1])

Taxonomy

Kingdom	Bacillati
Phylum	Actinomycetota
Class	Actinomycetes
Order	Mycobacteriales
Family	Nocardiaceae
Genus	Rhodococcus
Species	Rhodococcus jostii
Strain	RHA1

Profile

Physiology
Gram staining properties	Positive
Shape	Cocci
Mobility	No
Flagellar presence	Yes
Number of membranes	Not Available

AI-generated image based on bacteria physiology

Ecology, Host, and Life Cycle
Oxygen requirements	Aerobe
Optimal temperature	30
Temperature range	Mesophilic
Habitat	Terrestrial
Biotic relationship	Free living
Host(s)	Not Available
Cell arrangement	Filaments
Sporulation	Nonsporulating
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Rhodococcus jostii RHA1 plasmid pRHL3, complete sequence.

NC_008270.1 NC_008269.1 NC_008271.1 NC_008268.1

Gene Summary

Adenine Count

58520 bp

Thymine Count

58100 bp

Guanine Count

106279 bp

Cytosine Count

109462 bp

Genome Length

332361 bp

Protein-coding Genes

309 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
duf4192 family protein	RHA1_RS40770	Not Available	Negative	233 - 1207	34015.7
duf4192 family protein	RHA1_RS48040	Not Available	Negative	1433 - 2017	20858.8
hypothetical protein	RHA1_RS40780	Not Available	Negative	2014 - 2406	13937.6
hypothetical protein	RHA1_RS40785	Not Available	Negative	2628 - 2843	8019.62
duf3560 domain-containing protein	RHA1_RS40790	Not Available	Negative	2972 - 3976	37077.0
hypothetical protein	RHA1_RS40795	Not Available	Negative	4159 - 4755	22251.4
hypothetical protein	RHA1_RS51010	Not Available	Negative	4725 - 4886	5832.81
hypothetical protein	RHA1_RS40800	Not Available	Negative	4883 - 5368	18048.9
hypothetical protein	RHA1_RS40805	Not Available	Negative	5518 - 6249	26805.0
telomere-binding protein	RHA1_RS51250	Not Available	Negative	6249 - 11627	194300.0

Displaying genes 1 – 10 of 9054 in total

Pathways

1362 pathways

2,3-Dihydroxybenzoate Biosynthesis

Biosynthesis of Siderophore Group Nonribosomal Peptides

Lysine Biosynthesis

Taurine Metabolism

Glycolysis and Pyruvate Dehydrogenase

Arginine Metabolism

Ornithine Metabolism

Proline Metabolism

Show All 1362 Pathways

Metabolite ID	Metabolite name	CAS number	Average mass Monoisotopic mass
BASm0000237	(R)-4'-phosphopantothenateC9H18NO8P	Not available	Average299.2149Da Monoisotopic299.0770031Da
BASm0000250	2,5-didehydro-D-gluconateC6H7O7	`53736-12-2`	Average191.1156Da Monoisotopic191.019177578Da
BASm0000251	2-dehydropantoateC6H9O4	Not available	Average145.1333Da Monoisotopic145.050083776Da
BASm0000253	2-oxopent-4-enoateC5H5O3	Not available	Average113.093Da Monoisotopic113.024417601Da
BASm0000260	3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5	Not available	Average405.556Da Monoisotopic405.264647871Da
BASm0000274	aldehydo-D-galacturonateC6H9O7	Not available	Average193.132Da Monoisotopic193.0353762Da
BASm0000377	(S)-malateC4H4O5	Not available	Average132.0716Da Monoisotopic132.005873238Da
BASm0000387	(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6	Not available	Average455.432Da Monoisotopic455.1564286Da
BASm0000428	3-oxoadipateC6H6O5	Not available	Average158.11Da Monoisotopic158.022620453Da
BASm0000516	6-deoxyerythronolide BC21H38O6	Not available	Average386.5228Da Monoisotopic386.2668389Da

Displaying 1–10 of 1571 metabolites

Health Effects

No health effects information available for this bacterium.