Rhodococcus jostii RHA1

Gram-positiveCocciNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus jostii RHA1. This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. This organism may be useful in the bioremediation of contaminated environmental sites. (NCBI BioProject: bp_list[1])

Taxonomy

Kingdom	Bacillati
Phylum	Actinomycetota
Class	Actinomycetes
Order	Mycobacteriales
Family	Nocardiaceae
Genus	Rhodococcus
Species	Rhodococcus jostii
Strain	RHA1

Profile

Physiology
Gram staining properties	Positive
Shape	Cocci
Mobility	No
Flagellar presence	Yes
Number of membranes	Not Available

AI-generated image based on bacteria physiology

Ecology, Host, and Life Cycle
Oxygen requirements	Aerobe
Optimal temperature	30
Temperature range	Mesophilic
Habitat	Terrestrial
Biotic relationship	Free living
Host(s)	Not Available
Cell arrangement	Filaments
Sporulation	Nonsporulating
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence.

NC_008270.1 NC_008269.1 NC_008271.1 NC_008268.1

Gene Summary

Adenine Count

195907 bp

Thymine Count

196607 bp

Guanine Count

365466 bp

Cytosine Count

365095 bp

Genome Length

1123075 bp

Protein-coding Genes

1049 genes

Non-Coding Genes

16 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
duf4192 family protein	RHA1_RS40770	Not Available	Negative	233 - 1207	34015.7
duf4192 family protein	RHA1_RS48040	Not Available	Negative	1433 - 2017	20858.8
hypothetical protein	RHA1_RS40780	Not Available	Negative	2014 - 2406	13937.6
hypothetical protein	RHA1_RS40785	Not Available	Negative	2628 - 2843	8019.62
duf3560 domain-containing protein	RHA1_RS40790	Not Available	Negative	2972 - 3976	37077.0
hypothetical protein	RHA1_RS40795	Not Available	Negative	4159 - 4755	22251.4
hypothetical protein	RHA1_RS51010	Not Available	Negative	4725 - 4886	5832.81
hypothetical protein	RHA1_RS40800	Not Available	Negative	4883 - 5368	18048.9
hypothetical protein	RHA1_RS40805	Not Available	Negative	5518 - 6249	26805.0
telomere-binding protein	RHA1_RS51250	Not Available	Negative	6249 - 11627	194300.0

Displaying genes 1 – 10 of 9054 in total

Pathways

1362 pathways

2,3-Dihydroxybenzoate Biosynthesis

Biosynthesis of Siderophore Group Nonribosomal Peptides

Lysine Biosynthesis

Taurine Metabolism

Glycolysis and Pyruvate Dehydrogenase

Arginine Metabolism

Ornithine Metabolism

Proline Metabolism

Show All 1362 Pathways

Metabolite ID	Metabolite name	CAS number	Average mass Monoisotopic mass
BASm0000250	2,5-didehydro-D-gluconateC6H7O7	`53736-12-2`	Average191.1156Da Monoisotopic191.019177578Da
BASm0000253	2-oxopent-4-enoateC5H5O3	Not available	Average113.093Da Monoisotopic113.024417601Da
BASm0000260	3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5	Not available	Average405.556Da Monoisotopic405.264647871Da
BASm0000274	aldehydo-D-galacturonateC6H9O7	Not available	Average193.132Da Monoisotopic193.0353762Da
BASm0000428	3-oxoadipateC6H6O5	Not available	Average158.11Da Monoisotopic158.022620453Da
BASm0000516	6-deoxyerythronolide BC21H38O6	Not available	Average386.5228Da Monoisotopic386.2668389Da
BASm0000553	biphenyl-2,3-diolC12H10O2	Not available	Average186.2066Da Monoisotopic186.0680796Da
BASm0000592	(S)-1-phenylethanolC8H10O	Not available	Average122.1644Da Monoisotopic122.0731649Da
BASm0000599	2,5-dihydroxypyridineC5H5NO2	Not available	Average111.1Da Monoisotopic111.0320284Da
BASm0000893	crotonobetaineC7H13NO2	`927-89-9`	Average143.1836Da Monoisotopic143.0946287Da

Displaying 1–10 of 1460 metabolites

Health Effects

No health effects information available for this bacterium.