Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eal domain-containing protein | I4I81_30595 | Q9ABX9 | Positive | 6268153 - 6270129 | 71121.7 |
| hypothetical protein | I4I81_30600 | Not Available | Negative | 6270126 - 6270716 | 20762.4 |
| bifunctional copper resistance protein copd/cytochrome c oxidase assembly protein | I4I81_30605 | P9WM62 | Positive | 6270767 - 6272950 | 75328.4 |
| hypothetical protein | I4I81_30615 | Not Available | Negative | 682 - 1476 | 28611.3 |
| type iv secretory system conjugative dna transfer family protein | I4I81_30620 | Not Available | Negative | 1473 - 3173 | 58959.4 |
| hypothetical protein | I4I81_30625 | Not Available | Negative | 3173 - 3550 | 13088.3 |
| duf2637 domain-containing protein | I4I81_30630 | Not Available | Negative | 3547 - 4377 | 28438.2 |
| hypothetical protein | I4I81_30635 | Not Available | Negative | 4374 - 4607 | 7902.63 |
| whib family transcriptional regulator | I4I81_30640 | Not Available | Negative | 4604 - 4903 | 10388.8 |
| hypothetical protein | I4I81_30645 | Not Available | Positive | 5136 - 5909 | 29121.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
