Pseudonocardia benzenivorans CB1190

Gram-positiverodAerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Pseudonocardia

Description

Pseudonocardia benzenivorans CB1190 is a Gram-positive, rod-shaped bacterium that thrives in aerobic conditions and is isolated from fresh water, particularly within sludge environments. This microbe is characterized by its non-spore-forming nature, making it reliant on favorable conditions for survival and proliferation. Its optimal growth temperature is around 30.0°C, indicating a preference for moderate thermal environments commonly found in natural water bodies. The habitat of Pseudonocardia benzenivorans CB1190 suggests its potential role in the microbial communities of freshwater ecosystems, particularly in the degradation of organic materials present in sludge. The presence of this organism in such environments may indicate its involvement in biogeochemical cycling processes, particularly in the breakdown of complex organic compounds. Further research could elucidate its specific metabolic pathways and interactions with other microorganisms in these habitats, thereby contributing to a better understanding of microbial dynamics in freshwater ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusPseudonocardia
SpeciesPseudonocardia dioxanivorans
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature30
Temperature rangeMesophilic
HabitatFresh water - Sludge
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudonocardia benzenivorans CB1190

Accession NumberNC_015314.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

200 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinPSED_RS33570Not Available+431 - 6016200.2
hypothetical proteinPSED_RS33575Not Available+1178 - 217036906.0
is481 family transposasePSED_RS33580Not Available+2173 - 361850706.9
hypothetical proteinPSED_RS33585Not Available+3745 - 39336611.25
hypothetical proteinPSED_RS33590Not Available+3940 - 444317441.2
is481 family transposasePSED_RS33595Not Available+4744 - 515714964.1
lipopolysaccharide biosynthesis proteinPSED_RS33600Not Available-5164 - 700264807.6
bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubigPSED_RS33605Not Available-7142 - 772621609.8
is481 family transposasePSED_RS33610Not Available-8826 - 980935501.2
is110 family transposasePSED_RS33615Not Available-9827 - 1088537603.3

Displaying genes 1 – 10 of 200 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

103 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm0000950L-xyluloseC5H10O5Chemical structure of L-xylulose527-50-4
Average150.1299Da
Monoisotopic150.05282343Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da
BASm0001279(6S)-5-methyl-5,6,7,8-tetrahydrofolateC20H23N7O6Chemical structure of (6S)-5-methyl-5,6,7,8-tetrahydrofolateNot available
Average457.4399Da
Monoisotopic457.1709815Da
BASm0001691hydrogenselenideHSeChemical structure of hydrogenselenideNot available
Average79.98Da
Monoisotopic80.924896Da

Displaying 1–10 of 103 metabolites