Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alanine/ornithine racemase family plp-dependent enzyme | I4I81_30145 | C1FW08 | Negative | 6180739 - 6181878 | 39495.8 |
| duf1611 domain-containing protein | I4I81_30150 | Not Available | Negative | 6181875 - 6183011 | 39768.8 |
| polysaccharide deacetylase family protein | I4I81_30155 | B5ZA76 | Negative | 6183574 - 6184452 | 32849.7 |
| mbl fold metallo-hydrolase | I4I81_30160 | O34760 | Negative | 6184699 - 6185562 | 32598.2 |
| llm class flavin-dependent oxidoreductase | I4I81_30165 | Q65YW9 | Positive | 6186486 - 6187616 | 41795.6 |
| fumarylacetoacetate hydrolase family protein | I4I81_30170 | Q3TC72 | Positive | 6187828 - 6188673 | 30395.0 |
| amp-binding protein | I4I81_30175 | F4HUK6 | Positive | 6188796 - 6190415 | 58079.9 |
| pyruvate dehydrogenase | I4I81_30180 | Q59097 | Positive | 6190588 - 6192912 | 83018.4 |
| 2-oxo acid dehydrogenase subunit e2 | I4I81_30185 | P65634 | Positive | 6192941 - 6194107 | 40998.8 |
| helix-turn-helix transcriptional regulator | I4I81_30190 | P43462 | Negative | 6194261 - 6194935 | 24547.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
