Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nramp family divalent metal transporter | I4I81_00160 | Q9RTP8 | Negative | 40301 - 41584 | 44967.0 |
| metal-dependent transcriptional regulator | I4I81_00165 | Q9CCB5 | Negative | 41630 - 42295 | 23810.2 |
| duf3515 domain-containing protein | I4I81_00170 | Not Available | Negative | 42316 - 42840 | 17727.3 |
| lrp/asnc ligand binding domain-containing protein | I4I81_00175 | Not Available | Negative | 42882 - 43121 | 8019.71 |
| thiamine-phosphate kinase | I4I81_00180 | P9WG70 | Positive | 43243 - 44184 | 30873.8 |
| l-lactate permease | I4I81_00185 | Q46839 | Negative | 45364 - 47067 | 57910.7 |
| thiamine pyrophosphate-binding protein | I4I81_00190 | Q9HUI8 | Negative | 47118 - 48488 | 45369.1 |
| helix-turn-helix domain-containing protein | I4I81_00195 | Not Available | Negative | 48528 - 49105 | 20894.5 |
| duf3105 domain-containing protein | I4I81_00200 | Not Available | Positive | 49183 - 49857 | 23520.3 |
| 4fe-4s dicluster domain-containing protein | I4I81_00205 | P94534 | Negative | 49933 - 51270 | 48606.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
