Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-siderophore abc transporter substrate-binding protein | I4I81_22845 | O31567 | Negative | 4727140 - 4728063 | 31335.0 |
| nudix domain-containing protein | I4I81_22850 | Q9CA40 | Positive | 4728110 - 4728502 | 14173.8 |
| gmc family oxidoreductase n-terminal domain-containing protein | I4I81_22855 | P46371 | Negative | 4728722 - 4730152 | 49577.2 |
| m18 family aminopeptidase | I4I81_22860 | Q9XA76 | Positive | 4730126 - 4731397 | 44122.4 |
| hypothetical protein | I4I81_22865 | Not Available | Positive | 4731502 - 4731723 | 7694.89 |
| helix-turn-helix domain-containing protein | I4I81_22870 | C0H3Q8 | Positive | 4731720 - 4732034 | 11106.2 |
| duf2236 domain-containing protein | I4I81_22875 | Not Available | Positive | 4732153 - 4732974 | 30196.6 |
| mfs transporter | I4I81_22880 | Not Available | Negative | 4733191 - 4734303 | 36735.9 |
| hypothetical protein | I4I81_22885 | Not Available | Negative | 4734343 - 4734516 | 5937.07 |
| hypothetical protein | I4I81_22890 | Not Available | Positive | 4734517 - 4734708 | 6872.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
