Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | I4I81_22795 | Not Available | Negative | 4715329 - 4715526 | 7091.18 |
| helix-turn-helix domain-containing protein | I4I81_22800 | Not Available | Negative | 4715621 - 4716367 | 26369.1 |
| apc family permease | I4I81_22805 | O07576 | Negative | 4716364 - 4717788 | 47999.1 |
| apc family permease | I4I81_22810 | A2RHI9 | Positive | 4717998 - 4719401 | 47907.9 |
| primary-amine oxidase | I4I81_22815 | Q59118 | Positive | 4719405 - 4721291 | 69087.1 |
| msno8 family llm class oxidoreductase | I4I81_22820 | P0ADV6 | Positive | 4721468 - 4722445 | 34282.6 |
| helix-turn-helix transcriptional regulator | I4I81_22825 | P77626 | Negative | 4722697 - 4723248 | 19000.5 |
| benzoate/h(+) symporter bene family transporter | I4I81_22830 | P76103 | Positive | 4723299 - 4724432 | 36831.3 |
| tigr03086 family protein | I4I81_22835 | P9WKS2 | Negative | 4724534 - 4725085 | 20206.7 |
| m3 family metallopeptidase | I4I81_22840 | P27236 | Negative | 4725147 - 4727129 | 71733.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
