Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | I4I81_22695 | Q47PU3 | Negative | 4697995 - 4698480 | 17081.2 |
| alpha/beta hydrolase | I4I81_22700 | A0A068ACU9 | Negative | 4698565 - 4699464 | 32658.4 |
| helix-turn-helix domain-containing protein | I4I81_22705 | B1Q2A8 | Negative | 4699496 - 4700521 | 37168.9 |
| 3-keto-5-aminohexanoate cleavage protein | I4I81_22710 | Q8RHX2 | Negative | 4700616 - 4701479 | 30587.4 |
| hsp20/alpha crystallin family protein | I4I81_22715 | Q53595 | Positive | 4701637 - 4702077 | 16660.9 |
| merr family transcriptional regulator | I4I81_22720 | P40183 | Negative | 4702160 - 4702441 | 10190.1 |
| tetr/acrr family transcriptional regulator | I4I81_22725 | P9WMC6 | Negative | 4703401 - 4703997 | 21759.3 |
| crotonase/enoyl-coa hydratase family protein | I4I81_22730 | A4YI89 | Positive | 4704208 - 4705134 | 33847.0 |
| amp-binding protein | I4I81_22735 | O31826 | Positive | 4705167 - 4706780 | 58222.6 |
| sdr family oxidoreductase | I4I81_22740 | E3VWK2 | Positive | 4706783 - 4707562 | 27159.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
