Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid replication, integration and excision activator | I4I81_22445 | Not Available | Negative | 4654871 - 4655305 | 15521.3 |
| hypothetical protein | I4I81_22450 | Not Available | Positive | 4655428 - 4656255 | 30003.4 |
| protein phosphatase 2c domain-containing protein | I4I81_22455 | Not Available | Positive | 4656260 - 4657060 | 28775.4 |
| sam-dependent methyltransferase | I4I81_22460 | P25240 | Negative | 4657516 - 4659138 | 59253.3 |
| phospholipase d family protein | I4I81_22465 | Not Available | Positive | 4659237 - 4660466 | 45527.5 |
| ligand-binding protein sh3 | I4I81_22470 | Q8XGT8 | Positive | 4660977 - 4661291 | 10555.4 |
| glsb/yeaq/ymge family stress response membrane protein | I4I81_22475 | P58767 | Positive | 4661425 - 4661694 | 9057.72 |
| hypothetical protein | I4I81_22480 | Not Available | Positive | 4661767 - 4662384 | 21885.0 |
| hypothetical protein | I4I81_22485 | Not Available | Positive | 4662275 - 4662622 | 11570.3 |
| Trna-ser | Not Available | Not Available | Positive | 4662705 - 4662792 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
