Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | I4I81_22345 | P04285 | Negative | 4636696 - 4637715 | 36198.9 |
| abc transporter permease | I4I81_22350 | P94312 | Negative | 4637712 - 4638632 | 32095.8 |
| abc transporter permease | I4I81_22355 | P94311 | Negative | 4638632 - 4639636 | 35195.1 |
| abc transporter substrate-binding protein | I4I81_22360 | P33950 | Negative | 4639713 - 4641380 | 59345.7 |
| duf397 domain-containing protein | I4I81_22365 | Not Available | Negative | 4641502 - 4641690 | 6860.91 |
| helix-turn-helix domain-containing protein | I4I81_22370 | Not Available | Negative | 4641687 - 4642598 | 33178.0 |
| hypothetical protein | I4I81_22375 | Not Available | Positive | 4642953 - 4643135 | 6560.88 |
| recombination protein recr | I4I81_22380 | A4F6D1 | Negative | 4643194 - 4643811 | 22024.5 |
| ybab/ebfc family nucleoid-associated protein | I4I81_22385 | C1B9N1 | Negative | 4643813 - 4644121 | 10576.8 |
| had-ic family p-type atpase | I4I81_22390 | A0R3Y2 | Negative | 4644191 - 4646542 | 82168.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
