Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 6 protein | I4I81_22245 | P07984 | Negative | 4611097 - 4612110 | 35189.5 |
| duf1929 domain-containing protein | I4I81_22250 | P0CS93 | Negative | 4612092 - 4613984 | 67521.2 |
| helix-turn-helix domain-containing protein | I4I81_22255 | P58932 | Negative | 4614668 - 4616323 | 61503.3 |
| catalase | I4I81_22260 | P29422 | Negative | 4616569 - 4618032 | 54930.8 |
| mfs transporter | I4I81_22265 | Not Available | Positive | 4618060 - 4619034 | 32284.0 |
| endonuclease/exonuclease/phosphatase family protein | I4I81_22270 | Not Available | Positive | 4619111 - 4620106 | 33294.1 |
| aspartate-semialdehyde dehydrogenase | I4I81_22275 | P41400 | Negative | 4620103 - 4621152 | 36358.3 |
| aspartate kinase | I4I81_22280 | P41403 | Negative | 4621223 - 4622488 | 44805.3 |
| hypothetical protein | I4I81_22285 | Not Available | Positive | 4622737 - 4624155 | 46589.4 |
| hypothetical protein | I4I81_22290 | Not Available | Negative | 4624208 - 4624510 | 10621.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
