Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+ antiporter nhaa | I4I81_21995 | Q5Z2Z5 | Negative | 4558796 - 4559995 | 41336.5 |
| aminoacyl-trna hydrolase | I4I81_22000 | P40711 | Negative | 4560070 - 4560501 | 15788.8 |
| acetate--coa ligase | I4I81_22005 | Q82EL5 | Negative | 4560504 - 4562474 | 72400.0 |
| oxidoreductase | I4I81_22010 | Not Available | Positive | 4562600 - 4563349 | 25163.1 |
| had family hydrolase | I4I81_22015 | P9WGJ0 | Negative | 4563702 - 4564517 | 29256.2 |
| septum formation initiator | I4I81_22020 | P9WKX6 | Positive | 4564953 - 4566014 | 34887.2 |
| tada family conjugal transfer-associated atpase | I4I81_22025 | P9WMT2 | Positive | 4566032 - 4567180 | 39985.4 |
| secretion protein f | I4I81_22030 | Not Available | Positive | 4567174 - 4567977 | 26168.1 |
| type ii secretion system f family protein | I4I81_22035 | Not Available | Positive | 4567974 - 4568678 | 22728.3 |
| recombinase family protein | I4I81_22040 | P03012 | Positive | 4568866 - 4570536 | 62240.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
