Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | I4I81_21945 | Q8RXU4 | Positive | 4548338 - 4549495 | 39715.6 |
| potassium channel family protein | I4I81_21950 | P0A333 | Negative | 4549449 - 4550210 | 28073.0 |
| pyridoxal phosphate-dependent aminotransferase | I4I81_21955 | P96847 | Negative | 4550574 - 4551704 | 39895.4 |
| hypothetical protein | I4I81_21960 | Not Available | Negative | 4551882 - 4552559 | 20819.3 |
| phosphoribosylamine--glycine ligase | I4I81_21965 | P65894 | Negative | 4552819 - 4554084 | 42586.7 |
| glycerophosphodiester phosphodiesterase | I4I81_21970 | Q9SD81 | Positive | 4554208 - 4555320 | 39663.6 |
| ubp-type zinc finger domain-containing protein | I4I81_21975 | Not Available | Negative | 4555325 - 4555597 | 9941.35 |
| na+/h+ antiporter | I4I81_21980 | P9WJI2 | Positive | 4555616 - 4557190 | 55602.3 |
| alpha/beta hydrolase | I4I81_21985 | O31581 | Negative | 4557279 - 4558202 | 33425.9 |
| phage holin family protein | I4I81_21990 | Not Available | Negative | 4558206 - 4558757 | 19759.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
