Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threo-3-hydroxy-l-aspartate ammonia-lyase | I4I81_21560 | A4F2N8 | Positive | 4473665 - 4474627 | 33625.1 |
| zinc-dependent alcohol dehydrogenase family protein | I4I81_21565 | P43903 | Negative | 4474617 - 4475597 | 34189.4 |
| epoxide hydrolase | I4I81_21570 | Q06816 | Negative | 4475642 - 4476760 | 40584.1 |
| yafy family transcriptional regulator | I4I81_21575 | O34920 | Positive | 4476821 - 4477783 | 35335.3 |
| helix-turn-helix domain-containing protein | I4I81_21580 | P14706 | Positive | 4477780 - 4478267 | 17887.1 |
| spoiie family protein phosphatase | I4I81_21585 | P9WLZ6 | Positive | 4478498 - 4480348 | 66292.1 |
| smp-30/gluconolactonase/lre family protein | I4I81_21590 | Q9A9Z1 | Negative | 4480676 - 4481557 | 31172.8 |
| hypothetical protein | I4I81_21595 | Not Available | Positive | 4481662 - 4482201 | 19761.9 |
| rna polymerase subunit sigma-24 | I4I81_21600 | Q52997 | Negative | 4482240 - 4483385 | 40689.3 |
| hypothetical protein | I4I81_21605 | Q52996 | Negative | 4483391 - 4483798 | 14833.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
