Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetoacetate decarboxylase family protein | I4I81_21510 | Q89EP4 | Positive | 4462597 - 4463298 | 24686.0 |
| lysophospholipase | I4I81_21515 | A0QNZ7 | Negative | 4463445 - 4464293 | 30566.5 |
| carboxypeptidase regulatory-like domain-containing protein | I4I81_21520 | Not Available | Negative | 4464297 - 4466642 | 77430.4 |
| 4-alpha-glucanotransferase | I4I81_21525 | P65337 | Positive | 4466782 - 4468668 | 68202.4 |
| fumarylacetoacetate hydrolase family protein | I4I81_21530 | P49156 | Positive | 4468721 - 4469410 | 23797.2 |
| rna-binding s4 domain-containing protein | I4I81_21535 | P44754 | Positive | 4469639 - 4470004 | 13457.1 |
| hypothetical protein | I4I81_21540 | Not Available | Negative | 4470031 - 4470627 | 20315.0 |
| eama family transporter | I4I81_21545 | P39649 | Negative | 4470688 - 4471653 | 32914.9 |
| hypothetical protein | I4I81_21550 | Not Available | Negative | 4471674 - 4472594 | 30988.3 |
| l,d-transpeptidase | I4I81_21555 | O34816 | Negative | 4472609 - 4473373 | 26416.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
