Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | I4I81_21260 | Q9CB42 | Negative | 4419738 - 4420445 | 24891.8 |
| helix-turn-helix transcriptional regulator | I4I81_21265 | P9WMH8 | Negative | 4420448 - 4420909 | 16712.8 |
| fluoride efflux transporter crcb | I4I81_21270 | Q9FC39 | Positive | 4421023 - 4421436 | 13618.9 |
| fluoride efflux transporter crcb | I4I81_21275 | Q2JAK2 | Positive | 4421433 - 4421789 | 11599.3 |
| duf445 domain-containing protein | I4I81_21280 | P39385 | Negative | 4421786 - 4423033 | 46192.5 |
| hypothetical protein | I4I81_21285 | Not Available | Negative | 4423404 - 4423922 | 17987.5 |
| nad-dependent epimerase/dehydratase family protein | I4I81_21290 | P73212 | Positive | 4424198 - 4425106 | 31099.9 |
| cold-shock protein | I4I81_21295 | A0R5E1 | Negative | 4425187 - 4425390 | 7420.5 |
| hypothetical protein | I4I81_21300 | Not Available | Positive | 4425973 - 4426797 | 25984.6 |
| mycofactocin system transcriptional regulator | I4I81_21305 | P9WMB6 | Negative | 4426874 - 4427503 | 23010.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
