Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l,d-transpeptidase family protein | I4I81_21210 | P64704 | Negative | 4411132 - 4412313 | 40706.1 |
| udp-n-acetylmuramate dehydrogenase | I4I81_21215 | A4FQ15 | Negative | 4412402 - 4413433 | 35301.0 |
| duf2505 domain-containing protein | I4I81_21220 | P9WKV4 | Positive | 4413449 - 4413955 | 17859.3 |
| formyltetrahydrofolate deformylase | I4I81_21225 | Q46339 | Positive | 4413955 - 4414839 | 32482.7 |
| srpbcc domain-containing protein | I4I81_21230 | Not Available | Negative | 4414841 - 4415287 | 15954.6 |
| winged helix-turn-helix transcriptional regulator | I4I81_21235 | O53478 | Negative | 4415271 - 4415654 | 13851.7 |
| endopeptidase la | I4I81_21240 | A8M1E8 | Negative | 4415738 - 4418047 | 82004.1 |
| sam-dependent methyltransferase | I4I81_21245 | Not Available | Negative | 4418147 - 4418767 | 21742.9 |
| hypothetical protein | I4I81_21250 | Not Available | Negative | 4418764 - 4419312 | 18512.4 |
| duf2516 family protein | I4I81_21255 | P9WKW0 | Negative | 4419326 - 4419619 | 10130.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
