Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2fe-2s iron-sulfur cluster binding domain-containing protein | I4I81_21060 | E9RFT0 | Negative | 4377586 - 4378647 | 39252.8 |
| methane monooxygenase | I4I81_21065 | Q768T5 | Negative | 4378759 - 4380396 | 63501.8 |
| gaf domain-containing protein | I4I81_21070 | A0QTU7 | Positive | 4380787 - 4382577 | 64449.6 |
| atp-binding cassette domain-containing protein | I4I81_21075 | C0SPB4 | Positive | 4382646 - 4383542 | 32042.4 |
| abc transporter permease | I4I81_21080 | O07523 | Positive | 4383539 - 4384756 | 42064.9 |
| glycoside hydrolase family 6 protein | I4I81_21085 | P07984 | Negative | 4384729 - 4385904 | 40076.8 |
| hypothetical protein | I4I81_21090 | Not Available | Positive | 4386139 - 4386621 | 14536.9 |
| deoxyribodipyrimidine photo-lyase | I4I81_21095 | Q55081 | Negative | 4387051 - 4388418 | 50765.6 |
| citrate synthase | I4I81_21100 | P9WPD4 | Negative | 4388539 - 4389840 | 47793.1 |
| agmatinase | I4I81_21105 | Q8KZT5 | Positive | 4389952 - 4391016 | 37539.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
