Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2867 domain-containing protein | I4I81_20960 | Not Available | Negative | 4359089 - 4360045 | 34854.9 |
| tetr/acrr family transcriptional regulator | I4I81_20965 | Not Available | Positive | 4360095 - 4360670 | 20599.8 |
| enoyl-coa hydratase/isomerase family protein | I4I81_20970 | P64017 | Negative | 4360657 - 4361409 | 26343.7 |
| s-(hydroxymethyl)mycothiol dehydrogenase | I4I81_20975 | P80094 | Positive | 4361481 - 4362566 | 37647.3 |
| mbl fold metallo-hydrolase | I4I81_20980 | O67893 | Positive | 4362566 - 4363195 | 22034.6 |
| type ii toxin-antitoxin system prevent-host-death family antitoxin | I4I81_20985 | P9WF22 | Positive | 4363224 - 4363526 | 11331.6 |
| type ii toxin-antitoxin system vapc family toxin | I4I81_20990 | P9WF66 | Positive | 4363523 - 4363876 | 12219.8 |
| mfs transporter | I4I81_20995 | Not Available | Negative | 4363842 - 4365086 | 40421.0 |
| s-methyl-5-thioribose-1-phosphate isomerase | I4I81_21000 | Q5YQZ6 | Negative | 4365107 - 4366045 | 32047.7 |
| metal-dependent transcriptional regulator | I4I81_21005 | P0A673 | Positive | 4366146 - 4366838 | 25081.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
