Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase domain-containing protein | I4I81_20510 | Not Available | Positive | 4275250 - 4275969 | 25066.9 |
| trypsin-like peptidase domain-containing protein | I4I81_20515 | O53896 | Negative | 4276121 - 4277878 | 55646.2 |
| hamp domain-containing histidine kinase | I4I81_20520 | A0R3I7 | Negative | 4277945 - 4279378 | 50281.7 |
| response regulator transcription factor | I4I81_20525 | A1TEL7 | Negative | 4279375 - 4280082 | 26172.5 |
| nad(p)-dependent oxidoreductase | I4I81_20530 | Q9LSV0 | Negative | 4280122 - 4280982 | 28982.4 |
| metallophosphoesterase | I4I81_20535 | A5PJK1 | Positive | 4281054 - 4282184 | 39968.6 |
| helix-turn-helix domain-containing protein | I4I81_20540 | P77626 | Negative | 4282176 - 4282760 | 21648.1 |
| nad(p)/fad-dependent oxidoreductase | I4I81_20545 | Q6Q873 | Positive | 4282826 - 4283842 | 34851.4 |
| ydei/ompd-associated family protein | I4I81_20550 | Not Available | Negative | 4283797 - 4284249 | 16376.5 |
| hypothetical protein | I4I81_20555 | Not Available | Positive | 4284260 - 4284490 | 8161.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
