Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptidase | I4I81_20310 | B2KZE7 | Positive | 4235541 - 4236896 | 46725.0 |
| atp-binding cassette domain-containing protein | I4I81_20315 | P32010 | Positive | 4236922 - 4237884 | 34066.8 |
| abc transporter permease | I4I81_20320 | P48278 | Positive | 4237881 - 4238645 | 27182.4 |
| helix-turn-helix domain-containing protein | I4I81_20325 | P32010 | Negative | 4238767 - 4238874 | 4102.99 |
| abc-f family atp-binding cassette domain-containing protein | I4I81_20330 | O06476 | Negative | 4239102 - 4240904 | 65043.6 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | I4I81_20335 | A4F7X3 | Negative | 4240904 - 4241836 | 31949.4 |
| dha2 family efflux mfs transporter permease subunit | I4I81_20340 | P9WG86 | Negative | 4241880 - 4243397 | 52313.1 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | I4I81_20345 | Q47SX4 | Negative | 4243464 - 4244303 | 29017.3 |
| transglycosylase family protein | I4I81_20350 | H8EZH5 | Negative | 4244311 - 4246005 | 59191.4 |
| tatd family hydrolase | I4I81_20355 | O08343 | Negative | 4246304 - 4247119 | 29632.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
