Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pig-l family deacetylase | I4I81_20260 | Q81FP2 | Negative | 4226295 - 4226933 | 23224.8 |
| acyl-coa desaturase | I4I81_20265 | Q9FPD5 | Negative | 4227019 - 4227966 | 35065.4 |
| Trna-gln | Not Available | Not Available | Positive | 4228160 - 4228230 | Not Available |
| osmc family protein | I4I81_20275 | P0C0L2 | Negative | 4228378 - 4228818 | 14636.0 |
| l,d-transpeptidase | I4I81_20280 | Not Available | Negative | 4229012 - 4229482 | 16261.1 |
| bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmu | I4I81_20285 | C1AY41 | Positive | 4229725 - 4231203 | 50755.2 |
| ribose-phosphate diphosphokinase | I4I81_20290 | P65233 | Positive | 4231200 - 4232180 | 35545.8 |
| 50s ribosomal protein l25/general stress protein ctc | I4I81_20295 | C1A348 | Positive | 4232339 - 4233025 | 24170.2 |
| aminoacyl-trna hydrolase | I4I81_20300 | Q5YPZ6 | Positive | 4233029 - 4233628 | 21169.3 |
| fatty acyl-amp ligase | I4I81_20305 | O05598 | Negative | 4233647 - 4235284 | 57017.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
