Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic murein transglycosylase | I4I81_20210 | Not Available | Negative | 4213453 - 4214199 | 25600.3 |
| mazg family protein | I4I81_20215 | P33653 | Negative | 4214210 - 4214878 | 24225.3 |
| hypothetical protein | I4I81_20220 | Not Available | Negative | 4214911 - 4215837 | 31522.1 |
| transcription-repair coupling factor | I4I81_20225 | P64327 | Negative | 4216031 - 4219750 | 133641.0 |
| pdz domain-containing protein | I4I81_20230 | Q9RDE2 | Negative | 4219820 - 4223107 | 117806.0 |
| pqq-dependent sugar dehydrogenase | I4I81_20235 | P73001 | Positive | 4223172 - 4224392 | 40577.6 |
| hypothetical protein | I4I81_20240 | Not Available | Positive | 4224491 - 4224721 | 7321.7 |
| hypothetical protein | I4I81_20245 | Not Available | Positive | 4224718 - 4224864 | 5154.92 |
| duf2277 domain-containing protein | I4I81_20250 | Not Available | Negative | 4224915 - 4225184 | 9596.43 |
| nad(p)-dependent oxidoreductase | I4I81_20255 | Q0P8I7 | Negative | 4225252 - 4226274 | 36194.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
