Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cystathionine gamma-synthase | I4I81_20010 | P66876 | Negative | 4176459 - 4177607 | 39861.5 |
| sdr family oxidoreductase | I4I81_20015 | P66778 | Negative | 4177632 - 4179335 | 60197.5 |
| oxidoreductase | I4I81_20020 | Q9AHG2 | Negative | 4179344 - 4180258 | 32376.3 |
| metal-dependent hydrolase | I4I81_20025 | Not Available | Negative | 4180336 - 4181175 | 31296.4 |
| helix-turn-helix domain-containing protein | I4I81_20030 | Not Available | Negative | 4181243 - 4181914 | 23434.9 |
| cystathionine beta-synthase | I4I81_20035 | P9WP50 | Negative | 4181991 - 4183361 | 48151.0 |
| sigma-70 family rna polymerase sigma factor | I4I81_20040 | P66812 | Positive | 4183711 - 4184334 | 22772.0 |
| rna polymerase sigma factor | I4I81_20045 | Q52997 | Negative | 4184261 - 4185586 | 47440.1 |
| ycii family protein | I4I81_20050 | Q52996 | Negative | 4185583 - 4185939 | 12884.1 |
| acetyl-coa c-acetyltransferase | I4I81_20055 | O32177 | Positive | 4186123 - 4187343 | 42193.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
