Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia abyssalis |
| Strain | KRD168 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sediments; Southern Ocean |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
839379 bp
Thymine Count
826802 bp
Guanine Count
2301807 bp
Cytosine Count
2305241 bp
Genome Length
6273229 bp
Protein-coding Genes
6054 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dinb family protein | I4I81_19910 | P14706 | Positive | 4156816 - 4157316 | 18026.0 |
| atp-dependent dna ligase | I4I81_19915 | Q0SG75 | Positive | 4157351 - 4158856 | 53051.6 |
| protein kinase | I4I81_19920 | Q7TZN3 | Positive | 4158933 - 4160603 | 57792.1 |
| guab1 family imp dehydrogenase-related protein | I4I81_19925 | A0QYE8 | Positive | 4160625 - 4162052 | 49105.7 |
| helix-turn-helix domain-containing protein | I4I81_19930 | Q47719 | Positive | 4162192 - 4162380 | 6307.31 |
| phoh family protein | I4I81_19935 | O07635 | Negative | 4162490 - 4163878 | 49868.9 |
| duf885 domain-containing protein | I4I81_19940 | Not Available | Negative | 4164147 - 4165343 | 42675.8 |
| hypothetical protein | I4I81_19945 | Not Available | Positive | 4165686 - 4166069 | 12523.3 |
| hypothetical protein | I4I81_19950 | Not Available | Positive | 4166383 - 4166760 | 12499.2 |
| isoprenyl transferase | I4I81_19955 | Q9CB36 | Negative | 4166844 - 4167674 | 30498.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
